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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs589549 chr10:84411510 G/A TFDP3 chrX:132350697-132352376:- 0.71 8.46 2.36E-11 Box Plot
ACC rs59120929 chr2:59104233 T/C PRHOXNB chr13:28552243-28562774:- 0.65 8.59 1.51E-11 Box Plot
ACC rs59379958 chr3:159991182 G/GTAGAT KRT6C chr12:52862300-52867569:- 0.88 7.83 2.4E-10 Box Plot
ACC rs59395985 chr16:58173451 C/A PRHOXNB chr13:28552243-28562774:- 0.58 8.01 1.21E-10 Box Plot
ACC rs59528668 chr13:105090212 G/T DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs5995602 chr22:39024961 G/T EPGN chr4:75174190-75181024:+ -1.75 -8.59 1.51E-11 Box Plot
ACC rs60222090 chr3:159993572 A/G KRT6C chr12:52862300-52867569:- 0.88 7.86 2.11E-10 Box Plot
ACC rs60272156 chr1:201890826 T/C TM4SF5 chr17:4675179-4686508:+ 0.93 8.06 1.03E-10 Box Plot
ACC rs604482 chr10:84412569 C/A TFDP3 chrX:132350697-132352376:- 0.71 8.46 2.36E-11 Box Plot
ACC rs60534075 chr13:105090339 A/G DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs60553437 chr9:36867551 TAGC/T PRHOXNB chr13:28552243-28562774:- 0.64 7.78 2.82E-10 Box Plot
ACC rs60555451 chr6:38681515 T/G PRHOXNB chr13:28552243-28562774:- 0.64 7.85 2.19E-10 Box Plot
ACC rs60886066 chr1:167878821 C/A PRHOXNB chr13:28552243-28562774:- 0.58 7.71 3.67E-10 Box Plot
ACC rs60960309 chr2:20626505 C/T PRHOXNB chr13:28552243-28562774:- 0.65 7.82 2.42E-10 Box Plot
ACC rs60975248 chr1:167879253 C/A PRHOXNB chr13:28552243-28562774:- 0.58 7.71 3.67E-10 Box Plot